Speculative Species

In Speculative Evolution, we envisioned how species could be further developed to increase their resilience based on scientific publications on synthetic biology, genetic engineering and robotics, and formulated text prompts to create AI-generated images using DALL-E. As a result, each speculative species in the environment has a backstory rooted in real-life scenarios.
 
 


Leaf Beetle
Leaf Beetles
2022gene transferred to study its enzymatic, biological and ecological effects
Laboratory research by Kirsch et al., 2022
2054optimized to visualize change of planetary ecosystem using fluorescence alterations

Lineage of the 40 species from a total of 56

    • Leaf Beetle, Species 4-1Samsung G955F, Android 9, Zurich, Switzerland (4-1)
      • Leaf Beetle, Species 4-1-1Samsung G955F, Android 9, Zurich, Switzerland (4-1-1)
        • Leaf Beetle, Species 4-1-1-1Samsung G991U, Android 14, Milwaukee, United States (4-1-1-1)
          • Leaf Beetle, Species 4-1-1-1-1Samsung A146M, Android 13, São Paulo, Brazil (4-1-1-1-1)
    • Leaf Beetle, Species 4-2Samsung G955F, Android 9, Zurich, Switzerland (4-2)
      • Leaf Beetle, Species 4-2-1Samsung G955F, Android 9, Zurich, Switzerland (4-2-1)
    • Leaf Beetle, Species 4-3Samsung G955F, Android 9, Zurich, Switzerland (4-3)
      • Leaf Beetle, Species 4-3-1Samsung G955F, Android 9, Zurich, Switzerland (4-3-1)
        • Leaf Beetle, Species 4-3-1-1, Android 14, Houston, United States (4-3-1-1)
          • Leaf Beetle, Species 4-3-1-1-1, Android 11, Murcia, Spain (4-3-1-1-1)
            • Leaf Beetle, Species 4-3-1-1-1-1Samsung A536E, Android 14, Chaguanas, Trinidad and Tobago (4-3-1-1-1-1)
              • Leaf Beetle, Species 4-3-1-1-1-1-1, Android 10, , Indonesia (4-3-1-1-1-1-1)
                • Leaf Beetle, Species 4-3-1-1-1-1-1-1Samsung G955U, Android 9, , China (4-3-1-1-1-1-1-1)
        • Leaf Beetle, Species 4-3-1-2Samsung A146M, Android 14, Fordingbridge, United Kingdom (4-3-1-2)
    • Leaf Beetle, Species 4-4Samsung G955F, Android 9, Zurich, Switzerland (4-4)
      • Leaf Beetle, Species 4-4-1Samsung G955F, Android 9, Zurich, Switzerland (4-4-1)
        • Leaf Beetle, Species 4-4-1-1Samsung G955F, Android 9, Lucerne, Switzerland (4-4-1-1)
          • Leaf Beetle, Species 4-4-1-1-1Samsung G955U, Android 9, Xi'an, China (4-4-1-1-1)
      • Leaf Beetle, Species 4-4-2Samsung G955U, Android 9, , China (4-4-2)
    • Leaf Beetle, Species 4-6, Android 11, Palo Alto, United States (4-6)
      • Leaf Beetle, Species 4-6-1Samsung G955F, Android 9, Berlin, Germany (4-6-1)
        • Leaf Beetle, Species 4-6-1-1Samsung G986U1, Android 13, Monterrey, Mexico (4-6-1-1)
          • Leaf Beetle, Species 4-6-1-1-1Samsung G955F, Android 9, Lucerne, Switzerland (4-6-1-1-1)
            • Leaf Beetle, Species 4-6-1-1-1-1Samsung G955F, Android 9, Lucerne, Switzerland (4-6-1-1-1-1)
          • Leaf Beetle, Species 4-6-1-1-2Samsung G955F, Android 9, Lucerne, Switzerland (4-6-1-1-2)
        • Leaf Beetle, Species 4-6-1-2Samsung G955F, Android 9, Lucerne, Switzerland (4-6-1-2)
    • Leaf Beetle, Species 4-7Huawei LLY-L33, Android 13, , Mexico (4-7)
      • Leaf Beetle, Species 4-7-1Samsung G955F, Android 9, Lucerne, Switzerland (4-7-1)
    • Leaf Beetle, Species 4-8Samsung G955F, Android 9, Berlin, Germany (4-8)
      • Leaf Beetle, Species 4-8-1Samsung G780G, Android 13, São Paulo, Brazil (4-8-1)
        • Leaf Beetle, Species 4-8-1-1Samsung G955U, Android 9, , China (4-8-1-1)
          • Leaf Beetle, Species 4-8-1-1-1Samsung G955U, Android 9, , China (4-8-1-1-1)
          • Leaf Beetle, Species 4-8-1-1-2Samsung G955F, Android 9, Lucerne, Switzerland (4-8-1-1-2)
          • Leaf Beetle, Species 4-8-1-1-3Samsung G955F, Android 9, Lucerne, Switzerland (4-8-1-1-3)
      • Leaf Beetle, Species 4-8-2Samsung G955U, Android 9, , China (4-8-2)
      • Leaf Beetle, Species 4-8-3Samsung G955U, Android 9, , China (4-8-3)
    • Leaf Beetle, Species 4-9Samsung G950F, Android 9, São Paulo, Brazil (4-9)
      • Leaf Beetle, Species 4-9-1Samsung G955U, Android 9, , China (4-9-1)
        • Leaf Beetle, Species 4-9-1-1Samsung G986U1, Android 13, Monterrey, Mexico (4-9-1-1)
      • Leaf Beetle, Species 4-9-2Samsung G955F, Android 9, Lucerne, Switzerland (4-9-2)

Metabolic novelty originating from horizontal gene transfer is essential for leaf beetle survival

Roy Kirsch, Yu Okamura, Wiebke Haeger, Heiko Vogel, Grit Kunert and Yannick Pauchet, 2022
https://www.pnas.org/doi/10.1073/pnas.2205857119

Abstract

Horizontal gene transfer (HGT) provides an evolutionary shortcut for recipient organisms to gain novel functions. Although reports of HGT in higher eukaryotes are rapidly accumulating, in most cases the evolutionary trajectory, metabolic integration, and ecological relevance of acquired genes remain unclear. Plant cell wall degradation by HGT-derived enzymes is widespread in herbivorous insect lineages. Pectin is an abundant polysaccharide in the walls of growing parts of plants. We investigated the significance of horizontally acquired pectin-digesting polygalacturonases (PGs) of the leaf beetle Phaedon cochleariae. Using a CRISPR/Cas9-guided gene knockout approach, we generated a triple knockout and a quadruple PG-null mutant in order to investigate the enzymatic, biological, and ecological effects. We found that pectin-digestion 1) is exclusively linked to the horizontally acquired PGs from fungi, 2) became fixed in the host genome by gene duplication leading to functional redundancy, 3) compensates for nutrient-poor diet by making the nutritious cell contents more accessible, and 4) facilitates the beetles development and survival. Our analysis highlights the selective advantage PGs provide to herbivorous insects and demonstrate the impact of HGT on the evolutionary success of leaf-feeding beetles, major contributors to species diversity.
The mustard leaf beetle Phaedon cochleariae and its endo-PGs targeted for CRISPR-mediated knockout. The exon-intron structure of the PG encoding genes GH28-1, GH28-5, GH28-9, and the newly discovered GH28-10 as well as a corresponding primary structure of a consensus GH28 protein are shown schematically. Target sites of guide RNAs are indicated with arrows and nucleotide deletions fixed in the two mutant lines (triple mutant: wild-type GH28-1, knockout GH28-5, GH28-9, and GH28-10; quadruple mutant: knockout GH28-1, GH28-5, GH28-9, and GH28-10) are shown. Conserved disulfide bridges as well as functionally important amino acid residues are highlighted in the GH28 protein using single letter code.